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Bivariate von Mises Distribution 📂Probability Distribution

Bivariate von Mises Distribution

Definition 1

The mean direction μ,νR\mu, \nu \in \mathbb{R} and concentration κ1,κ2>0\kappa_{1}, \kappa_{2} > 0 with respect to a certain matrix AR2×2A \in \mathbb{R}^{2 \times 2} have a continuous probability distribution vM2(μ,ν,κ1,κ2)\text{vM}^{2} \left( \mu , \nu , \kappa_{1} , \kappa_{2} \right) with a probability density function that is proportional to the following, which is called the Bivariate von Mises Distribution: exp[κ1cos(θμ)+κ2cos(ϕν)+[cos(θμ)sin(θμ)]A[cos(ϕν)sin(ϕν)]] \exp \left[ \kappa_{1} \cos \left( \theta - \mu \right) + \kappa_{2} \cos \left( \phi - \nu \right) + \begin{bmatrix} \cos \left( \theta - \mu \right) & \sin \left( \theta - \mu \right) \end{bmatrix} A \begin{bmatrix} \cos \left( \phi - \nu \right) \\ \sin \left( \phi - \nu \right) \end{bmatrix} \right] Simplifying it to when A=[α00β]A = \begin{bmatrix} \alpha & 0 \\ 0 & \beta \end{bmatrix} yields exp[κ1cos(θμ)+κ2cos(ϕν)+αcos(θμ)cos(ϕν)+βsin(θμ)sin(ϕν)] \exp \left[ \begin{align*} & \kappa_{1} \cos \left( \theta - \mu \right) + \kappa_{2} \cos \left( \phi - \nu \right) \\ &+ \alpha \cos \left( \theta - \mu \right) \cos \left( \phi - \nu \right) \\ &+ \beta \sin \left( \theta - \mu \right) \sin \left( \phi - \nu \right) \end{align*} \right] For practical purposes, the following models, which further reduce the parameters, are famous.

Sine Model

When setting α=0\alpha = 0 and β=λ\beta = \lambda, the bivariate von Mises distribution with the following probability density function is shortly referred to as the Sine Model: fs(θ,ϕ):=c(κ1,κ2)exp[κ1cos(θμ)+κ2cos(ϕν)+λsin(θμ)sin(ϕν)],(θ,ϕ)[0,2π]2 f_{s} \left( \theta , \phi \right) := c \left( \kappa_{1} , \kappa_{2} \right) \exp \left[ \begin{align*} & \kappa_{1} \cos \left( \theta - \mu \right) + \kappa_{2} \cos \left( \phi - \nu \right) \\ &+ \lambda \sin \left( \theta - \mu \right) \sin \left( \phi - \nu \right) \end{align*} \right] \qquad , \left( \theta , \phi \right) \in \left[ 0, 2 \pi \right]^{2} Here, c(κ1,κ2)c \left( \kappa_{1} , \kappa_{2} \right) is a normalizing constant given as follows. c(κ1,κ2):=4π2m=1(2mm)(λ24κ1κ2)mIm(κ1)Im(κ2) c \left( \kappa_{1} , \kappa_{2} \right) := 4 \pi^{2} \sum_{m=1}^{\infty} \binom{2m}{m} \left( {{ \lambda^{2} } \over { 4 \kappa_{1} \kappa_{2} }} \right)^{m} I_{m} \left( \kappa_{1} \right) I_{m} \left( \kappa_{2} \right)

Cosine Model

When setting α=β=κ3\alpha = \beta = - \kappa_{3} and satisfying min{κ1,κ2}κ30\min \left\{ \kappa_{1} , \kappa_{2} \right\} \ge \kappa_{3} \ge 0, the bivariate von Mises distribution with the following probability density function is shortly referred to as the Cosine Model: fc(θ,ϕ):=c(κ1,κ2,κ3)exp[κ1cos(θμ)+κ2cos(ϕν)κ3cos(θμϕ+ν)],(θ,ϕ)[0,2π]2 f_{c} \left( \theta , \phi \right) := c \left( \kappa_{1} , \kappa_{2} , \kappa_{3} \right) \exp \left[ \begin{align*} & \kappa_{1} \cos \left( \theta - \mu \right) + \kappa_{2} \cos \left( \phi - \nu \right) \\ &- \kappa_{3} \cos \left( \theta - \mu - \phi + \nu \right) \end{align*} \right] \qquad , \left( \theta , \phi \right) \in \left[ 0, 2 \pi \right]^{2} Here, c(κ1,κ2,κ3)c \left( \kappa_{1} , \kappa_{2} , \kappa_{3} \right) is a normalizing constant given as follows. c(κ1,κ2,κ3):=4π2[I0(κ1)I0(κ2)I0(κ3)+2p=1Ip(κ1)Ip(κ2)Ip(κ3)] c \left( \kappa_{1} , \kappa_{2} , \kappa_{3} \right) := 4 \pi^{2} \left[ I_{0} \left( \kappa_{1} \right) I_{0} \left( \kappa_{2} \right) I_{0} \left( \kappa_{3} \right) + 2 \sum_{p=1}^{\infty} I_{p} \left( \kappa_{1} \right) I_{p} \left( \kappa_{2} \right) I_{p} \left( \kappa_{3} \right) \right]


Description 2

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If the von Mises Distribution can be considered a normal distribution on a unit circle S1S^{1}, then the bivariate von Mises distribution can be seen as a normal distribution on a torus S1×S1S^{1} \times S^{1} as shown in the figure above.

You might wonder what the point is of studying donuts, but in reality, similar motifs can be found in applications such as in bioinformatics, where it’s relevant to understand the molecular structure of proteins and the angles at which they are connected.

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  1. Mardia. (2007). Bivariate von Mises densities for angular data with applications to protein bioinformatics. https://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.575.3846 ↩︎

  2. Boomsma. (2008). A generative, probabilistic model of local protein structure. https://doi.org/10.1073/pnas.0801715105 ↩︎